FastQCFastQC Report
Mon 25 Mar 2013
81.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 81.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 32927480
Filtered Sequences 0
Sequence length 49
%GC 51

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[FAIL] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 2254773 6.847693780392547 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 1643243 4.990491224958606 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 1313688 3.9896402639983384 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 941468 2.859216678591863 RNA PCR Primer, Index 1 (100% over 25bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 871113 2.6455501605346052 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 634587 1.9272261345235044 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 429820 1.3053534616071438 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 429598 1.3046792527092872 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 383857 1.1657648869576414 RNA PCR Primer, Index 1 (100% over 27bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 313531 0.9521864412338873 RNA PCR Primer, Index 1 (100% over 29bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 309426 0.9397196505775723 RNA PCR Primer, Index 1 (100% over 25bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 287594 0.8734163683342909 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 284069 0.862711024348052 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 256321 0.7784409860699938 RNA PCR Primer, Index 1 (100% over 28bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 244366 0.7421339258273029 RNA PCR Primer, Index 1 (100% over 26bp)
AAGCTGCCAGTTGAAGAACTGTGGAATTCTCGGGTGCCAAGGAACTCCA 222518 0.6757820519517437 RNA PCR Primer, Index 1 (100% over 28bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 210293 0.6386550079143621 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 189895 0.5767067507139934 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 188011 0.570985086013263 RNA PCR Primer, Index 1 (100% over 26bp)
CACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCAC 187765 0.5702379896669895 RNA PCR Primer, Index 30 (100% over 36bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 183078 0.5560036783865635 RNA PCR Primer, Index 1 (100% over 29bp)
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCA 171180 0.5198697258338628 RNA PCR Primer, Index 7 (100% over 35bp)
CACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 168842 0.5127692735672453 RNA PCR Primer, Index 1 (100% over 33bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 159624 0.48477441942110355 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 150452 0.4569192662177609 RNA PCR Primer, Index 1 (100% over 25bp)
ACCGGGTGCTGTAGGCTTTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 132102 0.40119073794897153 RNA PCR Primer, Index 1 (100% over 31bp)
ACTGGACTTGGAGTCAGAAGGCATGGAATTCTCGGGTGCCAAGGAACTC 129178 0.3923106171501736 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 121061 0.36765947470015925 RNA PCR Primer, Index 1 (100% over 26bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 117320 0.3562981436781679 RNA PCR Primer, Index 1 (100% over 27bp)
ACTGGACTTGGAGTCAGAAGGCTTGGAATTCTCGGGTGCCAAGGAACTC 116239 0.353015171522388 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGTGGAATTCTCGGGTGCCAAGGAACTCCA 112921 0.3429384817787453 RNA PCR Primer, Index 1 (100% over 28bp)
AGAGGTAGTAGGTTGCATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 106605 0.3237569349370192 RNA PCR Primer, Index 1 (100% over 27bp)
CCCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTC 105121 0.31925006104323805 RNA PCR Primer, Index 1 (100% over 26bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 101887 0.30942847736905466 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 95871 0.29115802363254034 RNA PCR Primer, Index 1 (100% over 26bp)
ACCACGTTCCCGTGGTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACC 94071 0.28569146500126946 RNA PCR Primer, Index 2 (100% over 34bp)
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 94049 0.28562465150688726 RNA PCR Primer, Index 1 (100% over 32bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 87150 0.2646725470640328 RNA PCR Primer, Index 1 (100% over 27bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATGGAATTCTCGGGTGCCAA 86401 0.2623978512780207 No Hit
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 83059 0.252248274085961 RNA PCR Primer, Index 1 (100% over 25bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 80227 0.24364755517276146 RNA PCR Primer, Index 1 (100% over 24bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 79163 0.2404162116262769 RNA PCR Primer, Index 1 (100% over 26bp)
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA 78245 0.23762826672432874 No Hit
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 78005 0.2368993922401593 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 77501 0.2353687558234034 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 73595 0.22350632359354558 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTGGAATTCTCGGGTGCCAAGGAACTCCA 69165 0.2100525154065844 RNA PCR Primer, Index 1 (100% over 28bp)
CCCATAAAGTAGAAAGCACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 69150 0.2100069607513238 RNA PCR Primer, Index 1 (100% over 29bp)
TTCACAGTGGCTAAGTTCTGGAATTCTCGGGTGCCAAGGAACTCCAGTC 69128 0.20994014725694163 RNA PCR Primer, Index 1 (100% over 31bp)
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 68227 0.20720383096428882 No Hit
AGAGGTAGTAGGTTGCATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 66495 0.20194378677019925 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 65459 0.1987974785802011 RNA PCR Primer, Index 1 (100% over 25bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTTGGAATTCTCGGGTGC 60246 0.1829657173886371 No Hit
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCAA 56476 0.17151631403314194 No Hit
CTTCTCACTACTGCACTTGACTAGTGGAATTCTCGGGTGCCAAGGAACT 55948 0.16991279016796915 RNA PCR Primer, Index 1 (100% over 25bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 55153 0.16749839343915782 RNA PCR Primer, Index 1 (100% over 26bp)
CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 53656 0.16295203884415085 RNA PCR Primer, Index 1 (100% over 32bp)
CACTAGATTGAGAGCTCCTGGATGGAATTCTCGGGTGCCAAGGAACTCC 53383 0.16212294411840808 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGGTTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 50117 0.15220417717966878 RNA PCR Primer, Index 1 (100% over 26bp)
TTCACAGTGGCTAAGTTCCTGGAATTCTCGGGTGCCAAGGAACTCCAGT 50076 0.1520796611219565 RNA PCR Primer, Index 1 (100% over 30bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 49682 0.15088309217711163 RNA PCR Primer, Index 1 (100% over 26bp)
TTGAGAACTGAATTCCATAGGTTTGGAATTCTCGGGTGCCAAGGAACTC 49665 0.1508314635678163 RNA PCR Primer, Index 1 (100% over 26bp)
ACCGGGTGCTGTAGGCTTTTGGAATTCTCGGGTGCCAAGGAACTCCAGT 48913 0.14854765685075202 RNA PCR Primer, Index 1 (100% over 30bp)
CACTAGATTGAGAGCTCCTGGAATGGAATTCTCGGGTGCCAAGGAACTC 48396 0.14697753973277033 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 48160 0.14626081315667036 RNA PCR Primer, Index 1 (100% over 26bp)
CATTGCACTTGTCTCGGTCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 46564 0.1414137978369435 RNA PCR Primer, Index 1 (100% over 29bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 44209 0.13426171696103073 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 44094 0.13391246460403286 RNA PCR Primer, Index 1 (100% over 27bp)
GGCTGGTCCGAAGGTAGTGAGTTATCTCAATTGGAATTCTCGGGTGCCA 43765 0.13291329916531724 No Hit
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 43269 0.13140695856470036 RNA PCR Primer, Index 1 (100% over 26bp)
CAAAGTGCTGTTCGTGCAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 43189 0.13116400040331055 RNA PCR Primer, Index 1 (100% over 28bp)
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGTGGAATTCTCGGGTG 42173 0.12807843175365988 No Hit
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 41469 0.12594039993342945 RNA PCR Primer, Index 1 (100% over 28bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 37823 0.11486758172808852 No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCTGGAATTCTCGGGTGCC 36730 0.11154816584810012 No Hit
CAACAGCAGTCGATGGGCTGTTGGAATTCTCGGGTGCCAAGGAACTCCA 35623 0.10818623228986853 RNA PCR Primer, Index 1 (100% over 28bp)
ACTGGACTTGGAGTCAGAAGGATGGAATTCTCGGGTGCCAAGGAACTCC 34530 0.10486681640988013 RNA PCR Primer, Index 1 (100% over 27bp)
CCCCCACTGCTAAATTTGACTGTGGAATTCTCGGGTGCCAAGGAACTCC 34295 0.10415312681079755 RNA PCR Primer, Index 1 (100% over 27bp)
GAGAGATCAGAGGCGCAGAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 33998 0.10325114463663784 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCAGCACGTAAATATTGGTGTGGAATTCTCGGGTGCCAAGGAACTCC 33854 0.10281381994613617 RNA PCR Primer, Index 1 (100% over 27bp)
TGGAATTCTCGGGTGCCAAGGAACTCCAGTCACCACGATATCTCGTATG 33499 0.10173569310496886 RNA PCR Primer, Index 31 (100% over 49bp)
TGAGATGAAGCACTGTAGCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 33210 0.10085800674694814 RNA PCR Primer, Index 1 (100% over 29bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
AATTC 33232370 28.946302 355.344 26
TTCTC 33044660 27.691198 341.6914 28
ATTCT 33039445 26.487078 327.3011 27
GCCAA 29483140 25.367779 349.19528 37
CCAAG 29252090 25.16898 349.28497 38
TGCCA 31170195 24.684122 321.2669 36
AACTC 24387065 24.12465 400.70187 44
TCTCG 32941315 24.009804 297.13745 29
GAATT 33301055 22.21403 272.7573 25
GAACT 28763515 21.791191 307.04782 43
CTCGG 32780710 20.781326 258.11902 30
ACTCC 19992010 20.672695 418.5152 45
GGAAT 33540820 19.460331 237.17162 24
GTGCC 30630515 19.41821 257.26984 35
TGGAA 33079205 19.192503 236.97049 23
CAAGG 28736330 18.935532 267.564 39
GGAAC 27710935 18.259857 267.2026 42
AAGGA 28454705 17.937468 255.97774 40
AGGAA 28024590 17.66633 255.97845 41
CGGGT 32713015 15.882285 197.3777 32
TCGGG 32500655 15.779184 197.67168 31
GGTGC 32022935 15.54725 197.27242 34
GGGTG 32548185 12.101989 151.173 33
CTCCA 11073875 11.450917 133.43474 45
TTGGA 15427350 8.238296 139.18771 22
TCCAG 8742445 6.9232674 53.42411 45
CCAGT 7928540 6.278724 42.222248 7
TCAGA 6475165 4.9055743 173.78616 8
CAGTC 6120070 4.846571 28.04153 45
GACTG 7627710 4.6260457 134.42729 11
CAGAC 5314630 4.572795 189.9285 9
TATCA 5196980 4.526712 192.09189 6
AGTCA 5913015 4.4796906 27.6246 12
TTATC 5424560 4.348764 176.801 5
CTGGA 7074680 4.2906446 41.30819 23
ACTGA 5537935 4.1955304 167.30795 12
TGATG 7834080 4.1834445 117.9155 14
CTGAT 5923980 4.130685 154.06265 13
AGACT 5438735 4.1203766 167.47778 10
ATGGA 7056860 4.094379 59.30438 22
ATCAG 5365000 4.064515 167.36276 7
CTTAT 5025360 4.0287323 176.64207 4
TCACC 3636055 3.759855 33.389328 45
AGCTT 5330460 3.716834 153.48013 2
CACCA 3294105 3.7009108 35.560917 45
TAGCT 5182505 3.6136677 153.44412 1
GCTTA 5047705 3.5196743 153.56412 3
GTAGT 6556460 3.501188 118.9256 5
TAGTA 5197800 3.4672797 148.4045 6
GTCAC 4291850 3.3987775 26.675898 45
TGTTG 6833545 3.3586254 107.78349 17
GTTGA 6045620 3.2283967 110.01096 18
ACCAC 2809455 3.156409 31.57764 45
ATGTT 5128055 3.1484115 135.38069 16
AGGTA 5398905 3.1324363 130.11046 3
AGTAG 5322945 3.0883644 128.55492 7
TAGTT 5026695 3.0861807 117.85139 18
TTTGG 6236320 3.0650947 78.343056 21
GTGGA 6547095 3.040898 18.25 21
CTTGG 5444785 3.0392468 31.517405 23
ATAGT 4521150 3.0159092 130.46799 17
ACTTG 4311945 3.0066419 41.9398 7
GATGT 5407395 2.8875806 117.92018 15
GTATA 4309210 2.8745308 124.94809 15
TATAG 4288680 2.8608363 124.48792 16
TTGTA 4622385 2.8379512 118.96331 13
TGTAT 4613800 2.8326805 116.660545 14
GGTAG 5762660 2.6765556 103.30359 4
TTGAC 3787540 2.6409838 88.29199 19
AGATT 3941800 2.6294441 103.045616 10
TAGAT 3862810 2.5767524 102.957695 9
TGACT 3625690 2.5281286 74.82343 20
GAGGT 5334380 2.4776344 104.31233 2
TGAGG 5312390 2.4674208 100.82676 1
ATTGT 3931315 2.4136631 94.930405 12
GTAGA 4126110 2.3939626 90.03958 8
AGTTT 3881000 2.382772 84.89749 19
GTTTG 4687135 2.3036845 75.238594 20
GATTG 4236840 2.2624974 83.1633 11
ACTGG 3503355 2.124711 38.308407 22
CCACG 2281655 2.052097 15.246131 45
TCCCG 2371400 1.9630085 42.365463 12
GACTT 2611345 1.820844 31.408249 21
GTTGG 4010595 1.7144766 28.190874 21
CACTT 1826765 1.6632351 54.25062 6
GCACT 2014290 1.5951451 48.317635 5
AGTTG 2963455 1.5825024 28.472023 9
GATGG 3394690 1.5767157 42.20488 21
CTGTT 2450760 1.5728194 43.173992 19
GCTGT 2672320 1.4916731 13.130616 11
GCCTG 2343410 1.4856044 31.887167 17
AGAAC 1723150 1.4183801 43.912228 15
AGGCT 2276875 1.3808768 17.594025 18
AACTG 1792790 1.3582147 39.54498 17
CCTGG 2141185 1.3574039 5.9455748 17
AAGAA 1704445 1.342188 42.192875 14
ACTGT 1909905 1.3317425 36.24643 18
CGTGG 2734605 1.3276604 8.352607 19
TGCAC 1633125 1.293295 48.38967 4
TTGAT 2099370 1.2889255 47.861687 19
GGCTT 2276705 1.2708433 19.610369 19
AAGCT 1640615 1.2429272 40.780575 1
CCTGT 1675965 1.2215538 35.42918 18
TGTGG 2857375 1.2214903 12.487792 20
TTGCA 1747700 1.2186399 42.766033 3
CCCGG 1691260 1.217685 36.83312 13
AGCTG 1968510 1.1938599 32.169434 2
ATTGC 1692270 1.1799896 42.760406 2
TCTGA 1685060 1.1749622 7.641245 18
TTCCC 1225800 1.166621 9.569666 5
CGGCC 1616000 1.1634988 36.820488 15
AGTGG 2497580 1.1600392 17.301802 6
GTCCC 1376760 1.1396607 42.26989 11
CTGTA 1629475 1.1362039 13.400807 19
CTGCC 1368720 1.1330055 44.12042 4
CCGTG 1772100 1.1234225 9.966102 18
GGCCT 1771640 1.123131 32.442616 16
GCTTG 2005595 1.1195112 17.8818 20
CCGGC 1548425 1.1148456 36.838463 14
CATGG 1836430 1.1137561 9.635621 23
CTGTG 1992425 1.11216 8.924329 19
TGCTG 1992165 1.1120148 11.634206 16
TTCAA 1245370 1.0847512 27.756994 1
CCCCC 882260 1.083044 18.34684 1
GTTCC 1458645 1.0631567 13.749406 15
TCACA 1068480 1.0569826 39.628082 2
CAGTT 1498085 1.0445879 37.13474 8
GCTAA 1375605 1.0421561 36.22448 10
CCCGT 1240010 1.0264612 8.343011 7
TTGTC 1577215 1.0122061 38.24163 9
GCTGG 2070950 1.0054536 7.474741 21
AATCC 1014770 1.0038506 25.125706 8
TTGAA 1487965 0.992572 35.784843 11
GCCAG 1438190 0.9906075 36.74789 6
CACGT 1250255 0.99009484 7.914465 1
CTTGT 1538895 0.9876135 38.25982 8
GTAGG 2086915 0.96929955 20.982214 8
CACGA 1124565 0.96759427 11.477057 45
CAGAA 1158250 0.95339274 29.913137 15
TGTCC 1296445 0.9449346 36.122635 10
GTGCT 1692220 0.9445871 11.578585 15
TATTG 1530960 0.93994546 31.49569 1
TAGGC 1531850 0.92903477 16.685257 17
GAAGA 1452135 0.91540664 33.651108 13
CGTTC 1255495 0.9150876 7.4180045 4
TGAAG 1553080 0.90109456 31.111517 12
ATACC 908985 0.8992039 8.469726 19
ACAGT 1159775 0.87864363 27.934792 4
GCTGC 1357805 0.86078024 33.659462 3
CACAG 994660 0.85582185 32.40459 3
CCCAA 753780 0.8468681 16.24241 10
GGACT 1395220 0.84617156 22.523312 4
CAGTG 1393540 0.84515274 22.642017 5
CAAGT 1110290 0.84115386 24.250101 3
AACAT 869790 0.82314575 21.115332 1
GGCTG 1673615 0.8125461 7.4600053 20
TTCTG 1257495 0.80701995 9.919444 16
TTCAC 876030 0.7976088 33.233627 1
ACGTT 1139200 0.7943437 6.9562745 2
CAGGA 1201690 0.7918422 21.311108 12
AATGG 1346705 0.7813561 6.628869 23
TGGCT 1396835 0.779705 21.024805 8
AGGTT 1447575 0.77301353 23.615765 10
GGCTA 1264650 0.7669837 22.372744 9
CCGGG 1390830 0.7668955 7.1332045 2
TGTAG 1434050 0.7657911 6.2396765 10
GTGGT 1780860 0.7612942 7.321367 15
CTAAG 998815 0.7567006 27.984789 11
CCAGG 1095705 0.75470823 17.641703 11
TCCTT 900180 0.75434464 9.740021 11
TATGG 1368850 0.73097396 13.277536 22
GCTTT 1129135 0.72464263 6.078379 15
ACGAT 951680 0.7209912 7.7349663 45
TAGGT 1346950 0.7192792 23.195383 9
GCCCA 799035 0.7186438 6.458167 11
GACCT 902200 0.7144651 7.5715523 4
GTAAT 1062725 0.7089086 21.455215 6
AGGAT 1219105 0.7073228 18.753462 13
TGGAC 1162240 0.7048741 22.371483 3
AAGTA 963720 0.69847476 23.266129 4
GTCAG 1151160 0.6981543 22.140772 13
CCCAC 588630 0.69127804 13.387286 4
AAGTT 1029345 0.68664193 23.617151 13
CCACT 659025 0.6814635 11.615944 5
ACATT 781345 0.6805728 19.691195 2
TAAGT 1016825 0.67829025 24.58368 12
TCGGT 1210080 0.6754595 12.597079 15
TAGTG 1260665 0.6732025 7.46132 15
AGAAG 1063240 0.6702524 22.882277 16
GAAGG 1320155 0.66620624 17.903807 17
CATTG 941390 0.6564144 7.6305914 1
GGTTG 1532230 0.6550082 18.989992 11
AACGC 760595 0.6544285 17.394308 8
ACCGG 945925 0.6515416 8.3505945 1
CAACG 749040 0.6444863 16.937584 7
AGTTC 921595 0.6426117 23.5332 14
AGTAA 874635 0.6339087 23.228971 5
TTTTG 1119585 0.6326527 6.865177 14
GTTGT 1287080 0.63258815 17.839842 12
ATCCA 637730 0.6308677 25.00155 9
GAGTC 1039670 0.630538 22.255291 11
GTGGC 1280525 0.62169945 19.242146 7
ATTCA 707590 0.61633027 19.521286 4
CTGTC 844450 0.6154909 16.57656 12
CACTG 775165 0.61386424 9.089737 6
TCAAG 796015 0.60305965 24.130766 2
CCCCA 511130 0.60026324 14.28544 3
AAGGC 910340 0.5998599 17.782057 18
ACATG 787210 0.59638894 11.423632 22
TAATC 680900 0.5930825 22.095411 7
ATCCC 568965 0.58833706 17.549974 8
CATTC 644390 0.58670497 20.636734 3
GTTAT 949840 0.58316207 10.45483 20
CTCCT 609875 0.58043146 11.052477 10
CGCCT 688340 0.5697973 6.652716 29
CGACC 628350 0.56513155 8.118597 3
ATAGG 972840 0.56444025 19.742678 16
AGCAG 852720 0.56189173 7.4766927 16
CGCTG 883195 0.5599013 12.763837 10
TTGTG 1135010 0.55784714 10.286944 13
GTCGG 1143705 0.5552728 11.342557 14
CAAAG 673940 0.5547416 13.263433 1
CCAAA 514140 0.5526032 11.8770685 11
TGGAG 1181300 0.54867285 17.207989 9
GGATA 942815 0.5470198 18.627789 14
CACTA 551315 0.5453826 7.5272274 1
TCAAC 546655 0.54077274 19.63171 6
GATAG 920060 0.53381735 19.381836 15
AGCTC 670875 0.5312755 6.471437 13
ATTTG 864875 0.5309971 7.0215373 15
CTCAG 669810 0.5304321 7.151274 7
GGAGT 1138085 0.528601 17.084927 10
CTGCT 721130 0.52560717 8.337204 8
GGGCT 1071860 0.5203919 5.70898 18
TCCCA 501665 0.51874566 11.425229 9
CTTTT 688670 0.5081383 8.725266 13
TCCGT 688020 0.5014744 11.390251 17
AAGCA 607480 0.50003624 9.262491 15
ACTGC 630055 0.49894956 8.942967 7
AAAGA 632270 0.4978894 9.229982 2
AGACC 573730 0.49364674 7.188126 4
TTCCG 674480 0.49160552 11.909146 16
TGACA 644055 0.487935 11.266169 20
ACCTC 471040 0.48707792 9.861831 5
TTTGT 860010 0.48597264 14.071298 12
TGAGA 836255 0.48519385 5.0047655 9
TGAGT 906545 0.48410034 9.687057 19
TAAAT 580850 0.48401257 9.252342 12
TCTCA 530430 0.48294652 8.407092 25
CGGTG 988195 0.47977218 11.0703125 16
AAAGC 577090 0.47502127 9.1832485 14
AAATT 568935 0.474084 9.5947 13
ATCTC 519275 0.4727901 8.524858 24
GCAGC 683205 0.47058326 7.648022 17
AATTT 600630 0.46064794 8.7888975 14
ATCAC 460630 0.45567343 8.357479 21
CCCCG 484145 0.45515835 5.801686 10
TCTCC 473575 0.4507118 11.145166 9
AGAAT 613840 0.44489244 8.513015 4
GACAT 584645 0.44292608 11.2494545 21
ACATC 447000 0.44219005 12.260472 6
CGGAA 669810 0.4413649 7.5119753 4
ACTAG 580595 0.4398578 5.7636166 1
GTAAA 602180 0.43644163 9.034605 2
GGTCT 774935 0.43256414 5.828214 16
TATCT 539055 0.43214986 7.559174 23
ACGCT 543645 0.43052027 15.666935 9
TCCGA 543280 0.4302312 11.938027 7
TCCTG 586255 0.42730132 5.662263 16
ACCCT 412705 0.42675677 6.196235 21
ACGGA 645485 0.4253362 7.7961254 3
CCTCA 408020 0.42191222 9.261311 6
TGTTT 736875 0.4163918 9.04074 19
GTGAG 894395 0.41541544 8.726222 18
GATGA 715340 0.41503915 5.933918 7
GGTGA 890020 0.4133834 9.075544 17
TTTGA 671180 0.41207647 6.9140983 16
TCGCC 496445 0.4109496 6.861843 28
TCAGT 589180 0.41082466 5.2945514 12
TGTCT 638665 0.40987474 6.6952586 10
GAATC 540455 0.40944782 8.580832 6
AAAAG 519210 0.4088588 8.909652 13
GAGTT 765020 0.40852517 6.9460416 20
TGTAA 610150 0.4070108 8.2880125 1
AGTTA 608875 0.40616027 8.534286 19
AAACA 393610 0.40472394 12.827453 4
CTAGA 532300 0.40326962 5.7526627 2
CGGTC 635600 0.40293851 6.875436 15
CAGCA 466715 0.4015693 8.107163 4
GATCA 529885 0.40144 6.781408 11
CTAAA 422845 0.40016904 10.466509 11
TTATG 644950 0.39597237 10.476656 21
AGAGC 597485 0.39370707 8.367033 11
CAAAA 378105 0.38878113 11.836061 12
CCTTT 463385 0.38831344 9.717604 12
GTCCG 608690 0.3858789 10.026558 6
CATCC 371960 0.38462445 12.684879 7
CGACT 483170 0.38262925 6.637449 13
TCTGT 594745 0.38168827 6.3744364 17
TGTCG 679920 0.37952733 12.576739 13
ATTGA 565465 0.3772029 5.214103 7
CTGGT 674430 0.37646285 8.097997 3
TAAAC 389765 0.36886305 11.981856 3
AGCAC 427870 0.3681464 5.7053385 5
TCCCC 338415 0.365788 6.5570335 9
GTTCT 564330 0.3621689 9.727456 15
TGGTT 736145 0.3618086 5.3677793 16
GGTCC 568250 0.360242 9.734965 5
CAGCT 447620 0.3544767 9.364038 18
GCGAC 513175 0.3534686 6.104835 2
TGGTC 623650 0.3481177 8.375587 4
AGTGA 593580 0.34439418 5.6949053 16
AGAGG 680725 0.34352273 6.7679453 1
CTCAC 329565 0.34078598 5.2822804 4
CCGAA 394000 0.33900407 9.273957 8
ATCCT 369415 0.3363454 5.988778 8
GACCC 371090 0.3337545 5.6028776 24
CAGAT 435720 0.33010074 6.78243 9
TGTGC 589360 0.32897723 11.348444 14
GTGAT 614400 0.3280932 5.002071 5
TGCTA 467890 0.3262513 7.6956663 9
AAGGT 557760 0.32361147 5.667961 11
GAGAG 639750 0.322845 6.5615997 10
AGATC 421885 0.3196194 6.654119 10
CCGAC 354705 0.319018 5.6973553 12
AAATA 348130 0.3151843 6.4664564 12
AGCCC 348770 0.31368014 6.768281 10
TACAG 414010 0.3136533 5.243548 11
GGTTA 579020 0.3092001 5.7456136 17
GAAGC 465625 0.30681917 5.7186747 19
TTTCC 365035 0.30589682 7.2486496 2
CTCAA 308485 0.30516556 9.007236 26
TACCC 293400 0.30338964 6.3105774 20
TAATG 453585 0.3025715 5.2136674 22
GTCTC 408735 0.297913 7.4537444 11
TGGGC 610955 0.29662082 5.9721265 17
AGCAT 390695 0.2959899 5.420673 4
TAATT 383840 0.29438275 5.3556514 7
ACCCG 326085 0.2932775 5.4270635 25
CTACA 296115 0.29292867 6.927486 3
CATAG 386465 0.29278526 9.706309 16
CCCGA 324640 0.29197785 5.525399 11
AGACG 432015 0.2846722 5.547974 15
GCTAC 358545 0.28393692 5.5495367 2
TACAT 323575 0.28184268 5.9918156 4
GCTCC 330645 0.27370283 6.2685475 14
AACGG 409700 0.26996797 7.7586236 2
CGAAG 401495 0.26456133 6.622011 9
CGCGA 382290 0.2633167 6.2388654 1
TAGAC 345860 0.26202297 5.661421 3
GTACA 344340 0.2608714 5.256158 10
TTCAG 370635 0.25843713 5.3420644 10
TCAAT 293315 0.2554854 7.946908 27
GTTTC 384835 0.24697477 5.522679 1
TTGGG 577665 0.24694419 5.3341503 16
TGCAT 353630 0.24657986 6.6720815 14
AAGAT 317885 0.23039332 5.213103 16
AGCTA 299800 0.22712798 5.33573 1
TTCGC 304180 0.22170645 5.987159 27
GCATA 289825 0.21957095 7.1900997 15
CCGTA 274685 0.21752699 6.961222 5
ACCTA 213060 0.21076737 6.951377 6
CGTAG 345940 0.20980532 5.505917 6
CTAGC 260570 0.2063491 5.5907793 8
TAGCC 251815 0.1994159 5.638337 9
TCACG 242640 0.19215009 6.476588 22
TAGCA 243025 0.18411534 5.7487025 1
CCTAG 214795 0.17009923 5.5788455 7
GTTGC 300365 0.16766195 5.4026623 12